PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW11653 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 155aa MW: 18464.3 Da PI: 9.9921 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng++KKA+ELS+LCdae+a+iifs++gklye++s OIW11653 9 KRIENKINRQVTFAKRRNGLFKKAYELSILCDAEIALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 68.8 | 1.7e-23 | 81 | 145 | 7 | 71 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 ++ + ++++ +qe+ kLk+++e Lqr+qR +lGe+Le L++keL+qLe+qL++slk+iRs K + OIW11653 81 HHQPAMETQKRYQEYLKLKSKVEALQRTQRSFLGEELEHLDIKELEQLEHQLDSSLKQIRSNKVR 145 45667789*****************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MGRGKVELKR IENKINRQVT FAKRRNGLFK KAYELSILCD AEIALIIFSN RGKLYEFCSS 60 SSMEKTLERY HRCSYESLEV HHQPAMETQK RYQEYLKLKS KVEALQRTQR SFLGEELEHL 120 DIKELEQLEH QLDSSLKQIR SNKVRTFGYL SMRTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 3e-74 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW11653 |