PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11471

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 473aa MW: 52921.3 Da PI: 9.3406

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11471	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.6	3.2e-13	69	125	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g OIW11471 69 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 125 57*****************6666777775555599****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MASSSSDPSK SEIGGGAAET SEAAALAVAV MNDQALLYRG LKKAKKERGC TAKERISKMP 60 PCAAGKRSSI YRGVTRHRWT GRYEAHLWDK STWNQNQNKK GKQGAYDDEE AAARAYDLAA 120 LKYWGPGTLI NFPVTDYTRD LEEMQNVSRE EYLASLRRKS SGFSRGISKY RALSSRWEPS 180 YGRIAGSDFF NSMHYGYDSV AESEYASGVC IERKIDLTSH IKWWGSNKSR QPDAGTRLSE 240 EKKHGFAGDV CSELKMLEQK VQQTEPYQMP ELGRSHNEKK HRSSSVSALS ILSQSAAYKS 300 LQEKASKRQE NNTDNDENEN KNTVNKLDHG KAVEKSSNHD GGSDRVDIEI ETTGALSLQR 360 NIYPLTPFLS APLLTAYNTV DPSLVDPVLW TSLVPMLSAG LSCPTQVGLI ATVWCFPLQR 420 LRPVHLTPSF SLRNDVDIRL SDSRKGKHLK ELNSYIKQQH KHLHLNSEEL KQV

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MASSSSDPSK SEIGGGAAET SEAAALAVAV MNDQALLYRG LKKAKKERGC TAKERISKMP  60
PCAAGKRSSI YRGVTRHRWT GRYEAHLWDK STWNQNQNKK GKQGAYDDEE AAARAYDLAA  120
LKYWGPGTLI NFPVTDYTRD LEEMQNVSRE EYLASLRRKS SGFSRGISKY RALSSRWEPS  180
YGRIAGSDFF NSMHYGYDSV AESEYASGVC IERKIDLTSH IKWWGSNKSR QPDAGTRLSE  240
EKKHGFAGDV CSELKMLEQK VQQTEPYQMP ELGRSHNEKK HRSSSVSALS ILSQSAAYKS  300
LQEKASKRQE NNTDNDENEN KNTVNKLDHG KAVEKSSNHD GGSDRVDIEI ETTGALSLQR  360
NIYPLTPFLS APLLTAYNTV DPSLVDPVLW TSLVPMLSAG LSCPTQVGLI ATVWCFPLQR  420
LRPVHLTPSF SLRNDVDIRL SDSRKGKHLK ELNSYIKQQH KHLHLNSEEL KQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-134	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW11471