PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW11024 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27692.9 Da PI: 9.9224 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.5 | 4.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ien +nrqvt+skRrngi+KKA+ELSvLCd +v++i+fs+++k++ey+s OIW11024 9 KLIENPTNRQVTYSKRRNGIFKKAHELSVLCDSKVSLIMFSKNNKMHEYIS 59 569**********************************************86 PP | |||||||
2 | K-box | 53.5 | 1e-18 | 76 | 179 | 6 | 99 |
K-box 6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLe.sLslkeLqqLeqqLekslkkiRskK........nellleqieelqkkekelqeenkaLrk 96 g l+++++e++ ++l+kLk+ +++L+r++Rh++Ge+++ +L++++L++Le+++ +s+ kiR++K +++++ +++ +kk ++l++ n +L OIW11024 76 GDIdLWHSHYEKMLENLKKLKDINHKLRRQIRHRIGEGMDdDLNFQQLRSLEEDMVSSIGKIRERKikgtkeakFHVIKTRTDTCRKKVRSLEQMNGNLLL 176 43359**********************************737**********************9722222222579999****************99988 PP K-box 97 kle 99 +l+ OIW11024 177 ELK 179 776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGRGKIEIKL IENPTNRQVT YSKRRNGIFK KAHELSVLCD SKVSLIMFSK NNKMHEYISP 60 GFTTKKVLDQ YQKTLGDIDL WHSHYEKMLE NLKKLKDINH KLRRQIRHRI GEGMDDDLNF 120 QQLRSLEEDM VSSIGKIRER KIKGTKEAKF HVIKTRTDTC RKKVRSLEQM NGNLLLELKE 180 KCVIHPQFLL HDEGDPESAV AQANGASNLY AFCQHHTHLN LQHHGDDPGF KIDDLRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 1e-61 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW11024 |