PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10963

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 516aa MW: 57465.3 Da PI: 6.7136

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10963	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.7	1.8e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC+++Cv+apyfp ++p++fa+vhk+FGasnv kll++l +r+da++sl+yeAear+rdPvyG+vg+i+ lq++l+q + el+ +k+e OIW10963 7 PCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELTAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQMELSNAKKE 106 7**********************************************************************************************99987 PP
2	DUF260	52.2	1.7e-16	266	323	43	100
DUF260 43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +ll++l +r+da++sl+yeAear+rdPvyG+vg+i+ lq++l+q + el+ +k+e OIW10963 266 KQLLNELTAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQMELSNAKKE 323 57899************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQRFAYVH KVFGASNVAK LLNELTAAQR 60 DDAVKSLAYE AEARLRDPVY GCVGLISVLQ HRLRQIQMEL SNAKKELATY IGPHALQGMP 120 TTATLQHHHL AVAANPFTSS VSPAAHGGPL LLRESQPPQH QILEAQQLGA REHQEMFRGF 180 EHQQQQQQEF LRFNNGGFDL GSVPGSGFSQ QVSPDAPVSD DHLSPSLALG SFENPFHHMQ 240 QPQQVEHHAH HLPLEAQLLL PPQQEKQLLN ELTAAQRDDA VKSLAYEAEA RLRDPVYGCV 300 GLISVLQHRL RQIQMELSNA KKELATYIGP HALQGMPTTA TLQHHHLAVA ANPFTSSVSP 360 AAHGGPLLLR ESQPPQHQIL EAQQLGAREH QEMFRGFEHQ QQQQQEFLRF NNGGFDLGSV 420 PGSGFSQQVS PDAPVSDDHL SPSLALGSFE NPFHHMQQPQ QVEHHAHHLP LEAQLLLPPQ 480 QEKQVHQQQT QQSQLQHQHH QQQLERDECR SVGPSC

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQRFAYVH KVFGASNVAK LLNELTAAQR  60
DDAVKSLAYE AEARLRDPVY GCVGLISVLQ HRLRQIQMEL SNAKKELATY IGPHALQGMP  120
TTATLQHHHL AVAANPFTSS VSPAAHGGPL LLRESQPPQH QILEAQQLGA REHQEMFRGF  180
EHQQQQQQEF LRFNNGGFDL GSVPGSGFSQ QVSPDAPVSD DHLSPSLALG SFENPFHHMQ  240
QPQQVEHHAH HLPLEAQLLL PPQQEKQLLN ELTAAQRDDA VKSLAYEAEA RLRDPVYGCV  300
GLISVLQHRL RQIQMELSNA KKELATYIGP HALQGMPTTA TLQHHHLAVA ANPFTSSVSP  360
AAHGGPLLLR ESQPPQHQIL EAQQLGAREH QEMFRGFEHQ QQQQQEFLRF NNGGFDLGSV  420
PGSGFSQQVS PDAPVSDDHL SPSLALGSFE NPFHHMQQPQ QVEHHAHHLP LEAQLLLPPQ  480
QEKQVHQQQT QQSQLQHQHH QQQLERDECR SVGPSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	1e-69	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW10963