PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10948

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 438aa MW: 48751.2 Da PI: 8.4679

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10948	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.3	1.4e-16	129	178	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIW10948 129 SQHRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 178 689****************......55**********************997 PP
2	AP2	43.2	9.9e-14	221	271	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OIW10948 221 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 271 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MWDLNDSPDQ SYDNKDKSVG SVSNSSSSTV VIEDDNGSEE ELKKRSSKIF GFFVTHQHDD 60 AESMNSNNLP VTQQLLPVEE ESEMAAPSGG VRSSSNFPRG YCVGVKFCQS VEMSQPMKKS 120 RRGPRSRSSQ HRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGVD 180 ADINFNVKDY EEDLKQLSNL TKEEFVHVLR RQSSGFPRGS SKYRGVTLHK CGRWEARMGQ 240 FLGKKYVYLG LFDTEVEAAR AYDKAAIKCN GKEALTNFHH TIYDHELNPE SSGNAADHNL 300 DLSLGNSSSK HSNNKTLGCE NAAINHTPKL VNILPKVCSN SHMDGYGPLT PFKSSGEPHN 360 FAHHLHPPNF YLLSSSNGGQ IGSDLSLSLT NQQQWQMSPP PFLATAAASS GFSSQIRMIR 420 PSHGWVQKNG FHNLMRPP

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MWDLNDSPDQ SYDNKDKSVG SVSNSSSSTV VIEDDNGSEE ELKKRSSKIF GFFVTHQHDD  60
AESMNSNNLP VTQQLLPVEE ESEMAAPSGG VRSSSNFPRG YCVGVKFCQS VEMSQPMKKS  120
RRGPRSRSSQ HRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGVD  180
ADINFNVKDY EEDLKQLSNL TKEEFVHVLR RQSSGFPRGS SKYRGVTLHK CGRWEARMGQ  240
FLGKKYVYLG LFDTEVEAAR AYDKAAIKCN GKEALTNFHH TIYDHELNPE SSGNAADHNL  300
DLSLGNSSSK HSNNKTLGCE NAAINHTPKL VNILPKVCSN SHMDGYGPLT PFKSSGEPHN  360
FAHHLHPPNF YLLSSSNGGQ IGSDLSLSLT NQQQWQMSPP PFLATAAASS GFSSQIRMIR  420
PSHGWVQKNG FHNLMRPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-121	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW10948