PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10894

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 297aa MW: 33364.6 Da PI: 7.8461

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10894	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	151	205	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k OIW10894 151 RKKLRLTKEQSALLEESFKQHNTLNPKQKQALARQLHLRPRQVEVWFQNRRARTK 205 788899***********************************************98 PP
2	HD-ZIP_I/II	124.2	6e-40	151	240	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l OIW10894 151 RKKLRLTKEQSALLEESFKQHNTLNPKQKQALARQLHLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENKRLKKELQELK-TL 240 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MGHDQNPSSS GLHLVLGLSL TTEETTTTPP PPTMVDDHLY LLKPTPMKPY FSSFTTETEP 60 SLTLGLSSTE SYLNQQHVAK NKMDGNHKPH GEDPVDLSSH EASPHSVASS FSTGRVVKRE 120 RDPSCEDVEA EATERFSSRV SDEDEDGTNA RKKLRLTKEQ SALLEESFKQ HNTLNPKQKQ 180 ALARQLHLRP RQVEVWFQNR RARTKLKQTE VDCEFLKKCC ETLTDENKRL KKELQELKTL 240 KLAQPMYMPM PAATLSMCPS CDRIGRGVSN GGSNKSPFSM APKPHFYNPF TNYSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	208	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22800.1	8e-73	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW10894