PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW10671
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 253aa    MW: 27480.2 Da    PI: 7.3728
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW10671genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.92.2e-107397126
              --S---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
              +kt+lC+ f++ GtC+y  +C+FaH+
  OIW10671 73 FKTKLCCKFRA-GTCPYVTNCNFAHS 97
              69*********.*************8 PP

2zf-CCCH20.21.1e-06143168126
               --S---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
               yk + C+ f+    C+yGd+C+F+H+
  OIW10671 143 YKGRHCKKFYTEEGCPYGDSCTFMHD 168
               78888********************7 PP

3zf-CCCH42.41.1e-13219244126
               --S---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
               +kt++C+ +  tG+C++G++C+FaHg
  OIW10671 219 WKTRICNKWELTGYCPFGNKCHFAHG 244
               8************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDQTRDSNVV QIITGDENWS SSGDQSVWAT EDDYRFFNNS NDAESTPKRS RNSQDATASS  60
SNNRSKAIGK MFFKTKLCCK FRAGTCPYVT NCNFAHSIEE LRRPPMNWQE IVAAHEEEKS  120
VPAREEFQIP SLSGYSGETQ RSYKGRHCKK FYTEEGCPYG DSCTFMHDEN SRNRESVAIS  180
LGPGGYGGGG GSGAGVGGGA GSGGGGGGSG SLNLKPSNWK TRICNKWELT GYCPFGNKCH  240
FAHGAAVVMH CEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32360.15e-93C3H family protein