PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW10577 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | YABBY | ||||||||
Protein Properties | Length: 224aa MW: 25181.6 Da PI: 4.8439 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 211.2 | 3.5e-65 | 6 | 171 | 2 | 166 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslk.eelleelkveeenlksnvekeesastsvs 97 ++f+ +eq+CyvqC+fC+til+vsvP +s+++vvtvrCGhCtsllsvn++kas +lla+ shl+ + + ++ + ee+++++ ++++ s OIW10577 6 HLFDLPEQICYVQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASfvplHLLASLSHLEVIADlSNFMPKESSPEEDINKTLNSYNA-----S 101 7899***********************************************99888899999999876443123333333444444443333333.....3 PP YABBY 98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPki 166 +++ + +e++ +p v++PPekrqr Psaynrfik+ei+r+ka+nPd++h+eafs+aaknWa fP+ OIW10577 102 MMTYsDCEEEDVIPINNVVNKPPEKRQRTPSAYNRFIKDEIKRLKAENPDMTHKEAFSTAAKNWANFPPT 171 3333134566667766779*************************************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MSTLNHLFDL PEQICYVQCG FCTTILMVSV PCSSMSMVVT VRCGHCTSLL SVNMMKASFV 60 PLHLLASLSH LEVIADLSNF MPKESSPEED INKTLNSYNA SMMTYSDCEE EDVIPINNVV 120 NKPPEKRQRT PSAYNRFIKD EIKRLKAENP DMTHKEAFST AAKNWANFPP TQCKGDDENC 180 SQTEPLLDLD SHVDPNDAEV NEEGQGFRGR KIPRNSILGR MPFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 2e-65 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW10577 |