PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW10346 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 291aa MW: 32984.4 Da PI: 5.5927 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.7 | 4e-20 | 142 | 192 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+++g r++lg+f ta eAaka+++a+ +l+g OIW10346 142 HYRGVRQRP-WGKFAAEIRDPNKRG--SRVWLGTFETAIEAAKAYDRAAFRLRG 192 8********.**********96655..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 291 aa Download sequence |
MANPAEVSAL NRIKLHLLGE LSPLAISTSN QSKPWFEFEE PNPSFSRSES QSQSSSTSES 60 SASLNHYFTE PELEFPQFEL EVKPDVVDLE IETPEIVTEV KKPQLSRKPS LVISVPKKTE 120 WIRFQKQEPE PVQKVEPEEK KHYRGVRQRP WGKFAAEIRD PNKRGSRVWL GTFETAIEAA 180 KAYDRAAFRL RGSKAILNFP LEVCALAENG DGERKRRREE REEEVEEVKA VVKKKKTVET 240 VTEVKGVNET PLTPSVWTGF WDSDVNGVFN VPPLSPLSPI PALGYPQLMM V |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 214 | 218 | RKRRR |
2 | 214 | 236 | RKRRREEREEEVEEVKAVVKKKK |
3 | 215 | 237 | RKRRREEREEEVEEVKAVVKKKK |
4 | 216 | 238 | RKRRREEREEEVEEVKAVVKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G47230.1 | 1e-43 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW10346 |