PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10286

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 462aa MW: 51799.1 Da PI: 6.8787

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10286	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3.1e-16	138	183	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ OIW10286 138 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 183 899***************************.*********996 PP
2	Myb_DNA-binding	56.7	5.4e-18	190	233	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++++k++w+ OIW10286 190 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNSVKNHWHV 233 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MKASVLYSSQ QQNTNSSSYS SSSLSPSMGM VYADMGALSL CPNYGAAVST SQDCFAPNGG 60 SSWGFPFTRE CHIARNFEEH PNNSDIVMEG KGSDCSDGVG ENSEQTHQNA YTNEKNPNEN 120 HVSGKEVDTT GQSKLCARGH WRPAEDSKLK ELVALYGPQN WNLIAEKLEG RSGKSCRLRW 180 FNQLDPRINR RAFSEEEEER LMQAHRIYGN KWAMIARLFP GRTDNSVKNH WHVIMARKYR 240 EQSSAYRRRR LSQSFYRRME EDTTTFVSKD TTSSGIEPPP YCLNLPNNLS TFPYASSFHR 300 SGRSGVEYGL NGSHHMTGGR EAIISSSKKV PPTHFGLNAQ QTPSELFSGA RSNEMVSEYF 360 NQTRYLDNKP NDAPPPQLQS SGYYPYYNTY LMPMQQHQNY NNIYSFSSNS TASVMLTSEE 420 LSLSSVAEQH RDNEVVLSSD PPVDAIPTPT FIDFLGVGAT TT

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MKASVLYSSQ QQNTNSSSYS SSSLSPSMGM VYADMGALSL CPNYGAAVST SQDCFAPNGG  60
SSWGFPFTRE CHIARNFEEH PNNSDIVMEG KGSDCSDGVG ENSEQTHQNA YTNEKNPNEN  120
HVSGKEVDTT GQSKLCARGH WRPAEDSKLK ELVALYGPQN WNLIAEKLEG RSGKSCRLRW  180
FNQLDPRINR RAFSEEEEER LMQAHRIYGN KWAMIARLFP GRTDNSVKNH WHVIMARKYR  240
EQSSAYRRRR LSQSFYRRME EDTTTFVSKD TTSSGIEPPP YCLNLPNNLS TFPYASSFHR  300
SGRSGVEYGL NGSHHMTGGR EAIISSSKKV PPTHFGLNAQ QTPSELFSGA RSNEMVSEYF  360
NQTRYLDNKP NDAPPPQLQS SGYYPYYNTY LMPMQQHQNY NNIYSFSSNS TASVMLTSEE  420
LSLSSVAEQH RDNEVVLSSD PPVDAIPTPT FIDFLGVGAT TT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	251	YRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-75	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW10286