PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW10052

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 408aa MW: 45831.2 Da PI: 5.3857

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW10052	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.5	5.5e-08	16	61	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +r C+ + + ++++fC ++ +lC+ C + H+ H++v+l OIW10052 16 ARACDSCLRRRARWFCAADDAFLCHGCDSLVHSAnqlanrHERVKL 61 578*****************************66889999998875 PP
2	CCT	66.7	6.7e-23	354	396	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk+ OIW10052 354 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKR 396 9****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MITDMKAASA LAAKTARACD SCLRRRARWF CAADDAFLCH GCDSLVHSAN QLANRHERVK 60 LQSASNKVTT TAQSWHSGFT RKARTPRNNK HLALQQRLKH KVFFNNTNVL PIVPELGGEE 120 EQVFDDEESE EQMLCRVPVL EPFDAAAEFC HVYNNGLSVE TDAANEAASD LDSFSEFLAS 180 DMDLSEFAAD VQSLLGSSEQ VFDCKEECEI DGRGANGANA VMKVKDEGLD EDTACHFESV 240 FDMTNEAFDW NIDSVLSSAP TAPPQEEKAV VSVAAPESKM ETKRDIILRL KLNYEEVITA 300 WASQGSPWTT ENPPRFNFDE CWPDFLDSSS GGDVQFSSYG ELRSLRGHLV DEGREARVSR 360 YREKRRTRLF AKKIRYEVRK LNAEKRPRMK GRFVKRTCFV GGANNAFH

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MITDMKAASA LAAKTARACD SCLRRRARWF CAADDAFLCH GCDSLVHSAN QLANRHERVK  60
LQSASNKVTT TAQSWHSGFT RKARTPRNNK HLALQQRLKH KVFFNNTNVL PIVPELGGEE  120
EQVFDDEESE EQMLCRVPVL EPFDAAAEFC HVYNNGLSVE TDAANEAASD LDSFSEFLAS  180
DMDLSEFAAD VQSLLGSSEQ VFDCKEECEI DGRGANGANA VMKVKDEGLD EDTACHFESV  240
FDMTNEAFDW NIDSVLSSAP TAPPQEEKAV VSVAAPESKM ETKRDIILRL KLNYEEVITA  300
WASQGSPWTT ENPPRFNFDE CWPDFLDSSS GGDVQFSSYG ELRSLRGHLV DEGREARVSR  360
YREKRRTRLF AKKIRYEVRK LNAEKRPRMK GRFVKRTCFV GGANNAFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	365	381	RRTRLFAKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	2e-77	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW10052