PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW09954 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 28276.7 Da PI: 6.8369 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.8 | 1.4e-09 | 14 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed l+++ k +G+g g++R++k+c++rw++yl OIW09954 14 RGPWSPDEDATLKNYLKNHGTG---------GLKRCGKSCRLRWLNYL 52 89********************.........889************97 PP | |||||||
2 | Myb_DNA-binding | 32.6 | 1.8e-10 | 59 | 107 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqk 46 g +T eEd + + + G++ W++Ia+ + gRt++++k++w++ OIW09954 59 GGFTDEEDRVICTLYATIGSRqvhsiLWSLIAAQLH-GRTDNDVKNHWNT 107 569*********************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRAPCCDKA NVKRGPWSPD EDATLKNYLK NHGTGGLKRC GKSCRLRWLN YLRPHIKHGG 60 FTDEEDRVIC TLYATIGSRQ VHSILWSLIA AQLHGRTDND VKNHWNTKLK KKFLAENTNI 120 ATNNTGHMIN NINSQQFSTF TPHPQVEAFL FDHKNSPCYD PYVLGLDQTP FPVSLSMPLE 180 LDVSGFETSM SNNCGNGIIP FCKEEKDNNT QWLGYEDGDA AMLLDFVYED FLHNNGFVSQ 240 DKTNQIASSS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 5e-60 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW09954 |