PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW09953
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 343aa    MW: 38489.4 Da    PI: 7.1939
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW09953genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.78.7e-08129149526
               --SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                C++f++ G Ck Gd C FaHg
  OIW09953 129 ACPDFRK-GGCKKGDACEFAHG 149
               7******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MMLGEEPHPT VHVPHVPPWP FFDDDIFSSL SVNGDVSAVN NAGEYSPCYL HEALLALQRY  60
LPSNDDGDGD SELDSPVDAF SGDYFRMFEF KIRKCARGRS HDWTECPYAH PGEKARRRDP  120
RKFHYSGTAC PDFRKGGCKK GDACEFAHGV FECWLHPARY RTQPCKDGVS CRRRVCFFAH  180
MPEQLRVLPQ QSPRSTDSYD GSPLRTKTLQ LFPSTESNSP PAMNSPSESP PISPMTKSMF  240
SSLRNLQLDK MKSLPSSWNI PIGSPRFGSP RGPVIRPGFC SLPSTPTTQP PVRAGFNCFE  300
AWDSSCCEEE PVMERVESGR DIRAKMFEKL SKENSLAKLD LAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-115C3H family protein