PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW09839 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24334 Da PI: 8.9918 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.7 | 8.5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCdaeva+++fs++gklye+ss OIW09839 9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDAEVALMVFSTRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 63 | 1.2e-21 | 97 | 171 | 24 | 98 |
K-box 24 LkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + k+ie L+ ++R llGe+L+++ +++LqqLe+qLe+sl+kiR+kK++l++e+ie+l++ ek l +en++L+++ OIW09839 97 MAKKIEHLEVSKRMLLGEGLGTCCINDLQQLEKQLERSLNKIRAKKSQLFKEKIEKLREEEKCLLDENRRLQEQC 171 6799********************************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MVRGKTQMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD AEVALMVFST RGKLYEFSSS 60 SINKTVERYQ KKVKDLSHNT NGIQENTQHV MEGDISMAKK IEHLEVSKRM LLGEGLGTCC 120 INDLQQLEKQ LERSLNKIRA KKSQLFKEKI EKLREEEKCL LDENRRLQEQ CKIEKQQSLS 180 KQDLELVGEI RSEEEVETEL FIGPPERRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11880.1 | 1e-69 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW09839 |