PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09668

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 410aa MW: 46439 Da PI: 5.5402

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09668	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	27.6	6.1e-09	16	58	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +r C+ + + ++++fC +++ +lC++C + +H+ H++ OIW09668 16 ARACDSCLRRRARWFCATDDAFLCHSCDSLIHSAnqlanrHER 58 578*****************************65677777876 PP
2	CCT	66.6	6.7e-23	358	400	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk+ OIW09668 358 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKR 400 9****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MITDMKSTSA LAAKTARACD SCLRRRARWF CATDDAFLCH SCDSLIHSAN QLANRHERAK 60 LPTASNKVTT TSTAQAWHSG FKRKARTPRN NKHLALQQRL QHKVVFNNTS TNVLPVVPEL 120 GGGEEHVFND EESEEQMLCC VPVFEPFDAA EFCNIYNNEV SMKNDAAGEE ACDLNSFSEF 180 LASDMDLAEF SADVETLLGT SEVLEYKEED EIDGRKSKDA NAIIRVKDEE LDEDTTCHLD 240 SVFNMTNEAI DWNIDSVLLT ALSAAAPEEE EKVVVSVVAP ESKVETKRDI ILRLKLNYEE 300 VITAWDSQGS PWITGNPPRF NSDDCLQDFL GSSSGGDVQC SSYEEIRRLR GHFVDGGREA 360 RVSRYREKRR TRLFAKKIRY EVRKLNAEKR PRMKGRFVKR TCNNTFQPYH

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MITDMKSTSA LAAKTARACD SCLRRRARWF CATDDAFLCH SCDSLIHSAN QLANRHERAK  60
LPTASNKVTT TSTAQAWHSG FKRKARTPRN NKHLALQQRL QHKVVFNNTS TNVLPVVPEL  120
GGGEEHVFND EESEEQMLCC VPVFEPFDAA EFCNIYNNEV SMKNDAAGEE ACDLNSFSEF  180
LASDMDLAEF SADVETLLGT SEVLEYKEED EIDGRKSKDA NAIIRVKDEE LDEDTTCHLD  240
SVFNMTNEAI DWNIDSVLLT ALSAAAPEEE EKVVVSVVAP ESKVETKRDI ILRLKLNYEE  300
VITAWDSQGS PWITGNPPRF NSDDCLQDFL GSSSGGDVQC SSYEEIRRLR GHFVDGGREA  360
RVSRYREKRR TRLFAKKIRY EVRKLNAEKR PRMKGRFVKR TCNNTFQPYH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	385	RRTRLFAKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	1e-80	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW09668