PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09373

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 332aa MW: 36772.7 Da PI: 8.4082

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09373	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.3e-17	26	73	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l+++v ++G g+W+++ + g+ R++k+c++rw ++l OIW09373 26 KGPWTPDEDAILINYVSKYGEGNWNAVQKNSGLLRCGKSCRLRWVNHL 73 79****************************99*********996 PP
2	Myb_DNA-binding	21.7	4.7e-07	79	106	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+++ eE+ ++v++++++G++ W++ ++ OIW09373 79 KGSFSLEEERIIVELHAKHGNK-WARMSS 106 799******************.99775 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MMRIILNDKN KNNEDVSNDN EGYLKKGPWT PDEDAILINY VSKYGEGNWN AVQKNSGLLR 60 CGKSCRLRWV NHLRPNLKKG SFSLEEERII VELHAKHGNK WARMSSKNKQ PNSLYASSSS 120 SSSNLLNNQS FVVANNSDSN GYNYSSGSFN YKNGFNSNSM LPPLVPSSVS SSQTPSDSVT 180 SASSYVSAVD GSIGASIKVN NENYEVAPNS SKGNSGLLDA LVVEGQSHSH NNKPRSENSA 240 IAVAEAAEKS SNNKRKSLVL EENTKEGGTS RKKEIAKEPL DIDETVWDDD LCSLLTYFPI 300 EMPIPDWYRK QDHSKSQNLQ TQPTKEMEKP KK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	9e-44	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW09373