PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW09160

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 460aa MW: 50617.5 Da PI: 8.8285

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW09160	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.7e-17	143	192	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OIW09160 143 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 192 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MLIFNLNADS NENGDLLELL EKIPEASSGT SNSSIVNADG SSNIGGGDDS CSTRAGNGSG 60 VFTFDFGIMK VEGRNDVVTP TKELFPMSSG NWKMQQQSTL PFPAKKSGVD LSWEQGENSE 120 MVKMVQAQKP VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA 180 RAYDRAAIKF RGVDADINFN LIDYDDDLKP LKNLSKEEFV QTLRRQSTGF SRGSSKYRGV 240 TLQNCGRSEA PMGQFLGKKA YEKAATNCNG REAVTNFEPS KYESNMKPKA INEGDSHNLD 300 LNLGIATPGH GPKENKENLQ FQPVPYNMHL GRNSRVETNV HSVIDGPALK SLVVTEDRPS 360 VWNATYSSFF PTQEIGERIV PHPYQGLPNW AWQTQGQVTA TQMPQFSTAA AASSGFSISA 420 TSPPKSMNPF PQSLCFTSPS TPVSIAPQYY YQVKSPQAPQ

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MLIFNLNADS NENGDLLELL EKIPEASSGT SNSSIVNADG SSNIGGGDDS CSTRAGNGSG  60
VFTFDFGIMK VEGRNDVVTP TKELFPMSSG NWKMQQQSTL PFPAKKSGVD LSWEQGENSE  120
MVKMVQAQKP VKKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA  180
RAYDRAAIKF RGVDADINFN LIDYDDDLKP LKNLSKEEFV QTLRRQSTGF SRGSSKYRGV  240
TLQNCGRSEA PMGQFLGKKA YEKAATNCNG REAVTNFEPS KYESNMKPKA INEGDSHNLD  300
LNLGIATPGH GPKENKENLQ FQPVPYNMHL GRNSRVETNV HSVIDGPALK SLVVTEDRPS  360
VWNATYSSFF PTQEIGERIV PHPYQGLPNW AWQTQGQVTA TQMPQFSTAA AASSGFSISA  420
TSPPKSMNPF PQSLCFTSPS TPVSIAPQYY YQVKSPQAPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	2e-87	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW09160