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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW08994 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 336aa MW: 38172.8 Da PI: 6.8806 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l+++++ +G g+W+++++ g++R++k+c++rw +yl
OIW08994 14 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLKRCGKSCRLRWINYL 61
788*******************************************97 PP
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| 2 | Myb_DNA-binding | 46.9 | 6.6e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rg+++ +E l+++++ lG++ W+ Ia++++ gRt++++k++w+
OIW08994 67 RGSFSSQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109
899*******************.*********.***********8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 336 aa Download sequence |
MGHHSCCNKL KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PKLAGLKRCG KSCRLRWINY 60 LRPDLKRGSF SSQEAALIIE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLSHD 120 VIPSLSTSSG NGSMESFFPL STENPILINS HLHNHLDHLY LPISSPILQG SYDHNGIKID 180 MNNYNSNFLH IQNPMLQTVS SNNPSFFEDS WSLGSVPSHL NPNQETQLTK SDATTHHYNI 240 VEKFINPSTM QHYDLVEPNI TVPKACDSIE DYVYTIPYNS SASSQEHEAL ERIQCYIPSI 300 CPQDDQTLVA TNQVEYIDAL IISSFHHSNQ QQHLHQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G13890.2 | 1e-79 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW08994 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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