PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW08404 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 28008.3 Da PI: 6.9408 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.4 | 4.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ ++ + R++k+c++rw +yl OIW08404 14 KGTWTPEEDRKLLAYVTKYGHWNWRQLPKFADLARCGKSCRLRWKNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ T+eE+e +v++++++G++ W++Ia++++ gR+++ +k++w+ OIW08404 67 RGNYTQEEEETIVKLHAKFGNR-WSKIASHLP-GRSDNGIKNHWH 109 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MVRTPYSDKN GIKKGTWTPE EDRKLLAYVT KYGHWNWRQL PKFADLARCG KSCRLRWKNY 60 LKPGIKRGNY TQEEEETIVK LHAKFGNRWS KIASHLPGRS DNGIKNHWHA CLKKHFQHNS 120 VRNEKAVEPT QEKDVSLEIN DPFHNNSPST PQTRDASPSS QQTSVSDILC STAESASDGN 180 YLNMVQDVDQ VANFLDIDMG LLSGDFYTTE FDVADFSYIP GELYARFVSE PECLSPVYDA 240 QLWGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G79180.1 | 2e-53 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW08404 |