PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW08355
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 388aa    MW: 43718.8 Da    PI: 8.4309
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW08355genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.79.4e-09129152426
               ---SGGGGTS.--TTTTT-SS-SS CS
   zf-CCCH   4 elCrffartG.tCkyGdrCkFaHg 26 
               + C+ ++r+G  C++Gd+C F+Hg
  OIW08355 129 SVCPEYRRGGgSCSRGDTCEFSHG 152
               68*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MSSVGAEQHK FQPSHQLLSL KKSLRDIDIP PRKLLTRRAA AATYDGAADM YSDETFFQKY  60
LPHNNMNIIV DESDDDDSDP YSSDHFRMYE FKVRKCTRSR SHDWTDCPFA HPGEKARRRD  120
PKRYRYSGSV CPEYRRGGGS CSRGDTCEFS HGVFECWLHP DRYRTEACKD GKNCKRKVCF  180
FAHTPRQIRV LPVNSHTTSS NEIMNSCKNN NKNSKFLNPS NIKHSCLFCH CNSCVSTCSP  240
TSTLFGMSRF FSPPMSPSSP ASPANGVSPL SRYVGSEKSH HGVGVLSYKG MLNELRYSLE  300
GLNYNEANNN SPVSSASNVQ KNLNWLVDGS INCEDQQRFV LSPSSAPSSD FGNFNNGRYS  360
TSKILKNEAK FIDDVNAPDL GWVNELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.14e-71C3H family protein