PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08330

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 368aa MW: 41035.9 Da PI: 7.0277

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08330	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.8	4.1e-34	58	169	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskksq 101 + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akp+i++l++++ +++++ e+++ ss s+ +++k+++s + + q OIW08330 58 TNRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDKLAELPPWNPTSVeEHNAGSSDMSHMTNAKQSESCGYNFQLQ 158 679*************************************************************4333333322222222222222222222222222222 PP TCP 102 ksaasalnlak 112 ++ ++ n +k OIW08330 159 RQLGETENSDK 169 22222333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MSQHQYFKGK ISNQIEQTQD NTLNRTIEHT KHNGGTMGMR NTGGEIVQVE GGHIIRSTNR 60 KDRHSKVYTS KGPRDRRVRL SAHTAIEFYD VQDRLGYDRP SKAVDWLIKK AKPSIDKLAE 120 LPPWNPTSVE EHNAGSSDMS HMTNAKQSES CGYNFQLQRQ LGETENSDKH SALAFIQPHM 180 DTTDPIALFP TTPATSSFNF QSYPPDIISR ANNSSQDLGL SLHSFHNHTG LILGQSQQAA 240 VANQTPSSEE HQSLFVGSAP VGFENHYQRI MDWNNEAFMV NSHQFLGQGN SGSAYSQSGT 300 TLQSNFSPLV RSWNDIPMNS SEHQRSQNAS IFGSRFLSDH GLAGFSIQEA NHRDDTNNPS 360 PSHPNSHH

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MSQHQYFKGK ISNQIEQTQD NTLNRTIEHT KHNGGTMGMR NTGGEIVQVE GGHIIRSTNR  60
KDRHSKVYTS KGPRDRRVRL SAHTAIEFYD VQDRLGYDRP SKAVDWLIKK AKPSIDKLAE  120
LPPWNPTSVE EHNAGSSDMS HMTNAKQSES CGYNFQLQRQ LGETENSDKH SALAFIQPHM  180
DTTDPIALFP TTPATSSFNF QSYPPDIISR ANNSSQDLGL SLHSFHNHTG LILGQSQQAA  240
VANQTPSSEE HQSLFVGSAP VGFENHYQRI MDWNNEAFMV NSHQFLGQGN SGSAYSQSGT  300
TLQSNFSPLV RSWNDIPMNS SEHQRSQNAS IFGSRFLSDH GLAGFSIQEA NHRDDTNNPS  360
PSHPNSHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-59	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW08330