PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08188

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 371aa MW: 41619.6 Da PI: 6.7148

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08188	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.5	3.6e-14	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ Ed++l+ ++ +G ++W++ +++ g+ R++k+c++rw +yl OIW08188 16 RGPWSSAEDLKLITFIQNYGHDNWRALPKRAGLMRCGKSCRLRWVNYL 63 89********************************************97 PP
2	Myb_DNA-binding	50.2	6e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE e +v++ + lG++ W++Ia++++ gRt++++k+ w+++l OIW08188 69 RGNFTKEEVETIVKLQEALGNK-WSKIASHLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGDGRSACCD KNQVMRGPWS SAEDLKLITF IQNYGHDNWR ALPKRAGLMR CGKSCRLRWV 60 NYLKPGLKRG NFTKEEVETI VKLQEALGNK WSKIASHLPG RTDNEIKNVW NTHLKKRLVN 120 KKSSGSAPNE NKTESSIAPS LISSSSNPIF LNEIPNIVIP TVGNEFDMNV SHVAMIKDLQ 180 QDSVKQWSNE FVDISKNPKL SSTSVSSIMS NISNSSHMDA YKVGQQTGSP IRYYGSSHVN 240 KSLQEAYIQN SLVEMPSEAD CDFWKMLDNM NMQSNEVQLG QVDASKPSNF GQEGVQDTET 300 GKYLHELVNE FGSDATKEIN KDQCVQKNNA AELGMYPHSF DFDVIARPQS DSDIDLGYVQ 360 WWSSWPQNPG L

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGDGRSACCD KNQVMRGPWS SAEDLKLITF IQNYGHDNWR ALPKRAGLMR CGKSCRLRWV  60
NYLKPGLKRG NFTKEEVETI VKLQEALGNK WSKIASHLPG RTDNEIKNVW NTHLKKRLVN  120
KKSSGSAPNE NKTESSIAPS LISSSSNPIF LNEIPNIVIP TVGNEFDMNV SHVAMIKDLQ  180
QDSVKQWSNE FVDISKNPKL SSTSVSSIMS NISNSSHMDA YKVGQQTGSP IRYYGSSHVN  240
KSLQEAYIQN SLVEMPSEAD CDFWKMLDNM NMQSNEVQLG QVDASKPSNF GQEGVQDTET  300
GKYLHELVNE FGSDATKEIN KDQCVQKNNA AELGMYPHSF DFDVIARPQS DSDIDLGYVQ  360
WWSSWPQNPG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	1e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW08188