PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08148

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 393aa MW: 44391.8 Da PI: 5.5072

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08148	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.6	1.2e-11	52	108	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ ++k+ + g ++ +e Aa+ ++ a++k++g OIW08148 52 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQKKKGRQGAYDIEEAAARTYDLAALKYWG 108 57*****************777797777777********************98 PP
2	AP2	50.8	4.3e-16	151	202	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa a++ a+ + +g OIW08148 151 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYKTQEEAAIAYDMAAIEHRG 202 89**99*******99644...4********************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MKRSHASSCS SSSSSSVEFE TPIEKRRPKH PRRIGKSQEC NKQKQNTGKR SSIYRGVTRH 60 RWTGRFEAHL WDKSSWNNIQ KKKGRQGAYD IEEAAARTYD LAALKYWGKD ATLNFPIETY 120 SKDLEEMNKV TKEEFLANLR RQSSGFSRGV SKYRGVARHH HNGRWEARIG RVCGNKYLYL 180 GTYKTQEEAA IAYDMAAIEH RGLNAVTNFD ISNYINRKNE QSQETETAPS SIDSEEAEAE 240 AEVEQKNTAP PPPENVNNEP QQVQNTNVIL SEESSLFIPM DHVFEKDMPW NFMDTSLTQF 300 QDIDLGLSKE ENLSSMFNGG GFEDDIDYLF STEPSDGDFN FNAVLDSIIE CGNIDGAAGT 360 MVDNNNNQKM LSSASYSPST SSTTTTVSCY YSL

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MKRSHASSCS SSSSSSVEFE TPIEKRRPKH PRRIGKSQEC NKQKQNTGKR SSIYRGVTRH  60
RWTGRFEAHL WDKSSWNNIQ KKKGRQGAYD IEEAAARTYD LAALKYWGKD ATLNFPIETY  120
SKDLEEMNKV TKEEFLANLR RQSSGFSRGV SKYRGVARHH HNGRWEARIG RVCGNKYLYL  180
GTYKTQEEAA IAYDMAAIEH RGLNAVTNFD ISNYINRKNE QSQETETAPS SIDSEEAEAE  240
AEVEQKNTAP PPPENVNNEP QQVQNTNVIL SEESSLFIPM DHVFEKDMPW NFMDTSLTQF  300
QDIDLGLSKE ENLSSMFNGG GFEDDIDYLF STEPSDGDFN FNAVLDSIIE CGNIDGAAGT  360
MVDNNNNQKM LSSASYSPST SSTTTTVSCY YSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-100	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW08148