PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW08135

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 545aa MW: 60453.6 Da PI: 5.6332

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW08135	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.4e-18	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l OIW08135 39 KGPWTSTEDAILVEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	47.5	4e-15	92	135	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ l+ ++++++G++ W++ a++++ gRt++++k++w++ OIW08135 92 KGAFTAQEERLITELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 135 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MRRVKNNEIE DEMLPNDLTE SQLNDEGDGG SASGVILKKG PWTSTEDAIL VEYVKKHGEG 60 NWNAVQKHSG LSRCGKSCRL RWANHLRPNL KKGAFTAQEE RLITELHAKM GNKWARMAAH 120 LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP EVCLQAFQES QQRQSTGGGH NAGNKVRHDF 180 LHKNSYEIHD AIFDSLKDNQ GISPYVPELP DISDYSNMLK DLDSSQYFNF APSTSPNHKR 240 LRESTMPFLG SSDMHRNVFY PFDHIQDNAS FGMQSPLDHG PSSHSSMCYS HSFSNGNSST 300 SKSTYEAVKL ELPSLQYPEI DLGSWGTSPP PPLLDSVDDF IQSPTPISAM ESDSSSPHNS 360 GLLDALVYQS KTMSSSKNHY SNKSSNSSTA TPGHRADSST LNMYETELED HTDPVSPFGA 420 TSILNECPAV ANANSFDETL PDGTFNGNIV KLESADQVWT PNSENQNMSE LNITRPDLLL 480 DADWLQQDFG HGNNQTITTD VMSTLFADDL ATDYKHMTVG TSKSSQVWGF GSCARNNNVF 540 CLSGV

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MRRVKNNEIE DEMLPNDLTE SQLNDEGDGG SASGVILKKG PWTSTEDAIL VEYVKKHGEG  60
NWNAVQKHSG LSRCGKSCRL RWANHLRPNL KKGAFTAQEE RLITELHAKM GNKWARMAAH  120
LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP EVCLQAFQES QQRQSTGGGH NAGNKVRHDF  180
LHKNSYEIHD AIFDSLKDNQ GISPYVPELP DISDYSNMLK DLDSSQYFNF APSTSPNHKR  240
LRESTMPFLG SSDMHRNVFY PFDHIQDNAS FGMQSPLDHG PSSHSSMCYS HSFSNGNSST  300
SKSTYEAVKL ELPSLQYPEI DLGSWGTSPP PPLLDSVDDF IQSPTPISAM ESDSSSPHNS  360
GLLDALVYQS KTMSSSKNHY SNKSSNSSTA TPGHRADSST LNMYETELED HTDPVSPFGA  420
TSILNECPAV ANANSFDETL PDGTFNGNIV KLESADQVWT PNSENQNMSE LNITRPDLLL  480
DADWLQQDFG HGNNQTITTD VMSTLFADDL ATDYKHMTVG TSKSSQVWGF GSCARNNNVF  540
CLSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-101	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW08135