PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW07788
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 596aa    MW: 66637.5 Da    PI: 8.2118
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW07788genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.42.8e-23115216199
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f k+lt+sd+++ g +++p+ +ae++         ++ +  t++ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF +   +++ l+v
  OIW07788 115 FSKTLTQSDANNGGGFSVPRYCAETIfpkldysADPPVQ--TIIAKDVHGQCWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR--ADNGDLCV 211
               88****************************996555555..8************************************************3..478888** PP

               EEE-S CS
        B3  95 kvfrk 99 
               +++r+
  OIW07788 212 GIRRA 216
               **996 PP
2Auxin_resp110.71.4e-36270352283
  Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 ++ a ++ +FevvY+Pr st+e++vk++ v++al+++++ GmRfkm fetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+
    OIW07788 270 VTCAVNGRPFEVVYYPRGSTPEYCVKASAVRAALQIQWCSGMRFKMPFETEDSSRISWfMGTISSVHVVDPIRWPNSPWRLLQ 352
                 6678899**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    
MDSVERVSEK CLDSQLWHAC AGSMVQMPHI NSKVFYFPQG HAEHALGKVD FGNTPIPPLI  60
PCKVDAMKFM ADLGTDEVYV KVRLTPLREN EFDLEDDCFK GIRGVVESQE KTSSFSKTLT  120
QSDANNGGGF SVPRYCAETI FPKLDYSADP PVQTIIAKDV HGQCWKFRHI YRGTPRRHLL  180
TTGWSNFVNQ KKLVAGDSIV FLRADNGDLC VGIRRAKKGI GSEFMSSGWN NNQLAPLLFG  240
GANENKMLMR RKYGAELMGK VAAESVVEAV TCAVNGRPFE VVYYPRGSTP EYCVKASAVR  300
AALQIQWCSG MRFKMPFETE DSSRISWFMG TISSVHVVDP IRWPNSPWRL LQVVWDEPDL  360
LQNVKCVNPW LVELVSNIPN FNLSPFSPPR KKPRFPQTPD FHHINQLPMP SFYNNRLNHT  420
NSVCNIRGNS SAGIQGARHA QFGLTPSDFP FNKQQTDALF PGALPWLNRS SQPIRPPHDA  480
YKTENNVDIS CLLTMGNPGQ SLKEPVKAKS PHILLFGQLI QTEQHDSNIM STSTNENSST  540
NATSRKTSNA SDSLSSDLLQ NSPMEKNSSD EGSPQYKDQQ KSDLRTENVN RLCLAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein