PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW07600
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 422aa    MW: 48686.5 Da    PI: 9.2571
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW07600genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.13.1e-08399420426
               ---SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                lCr++ar G C yGd+Ck+ H+
  OIW07600 399 QLCRHYAR-GRCYYGDNCKYLHD 420
               69******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MAIKDSSMEI YEISTETEGS DTDSDWEGSE EEPDFEETND KFSNLSLKNK EKSRVVENKG  60
LGTETELEVL KMSSPSLADE NFEKVQKMIE GGTPEKLKVD ECKLYLRNHG LRLTGNKETL  120
IQRIKEHLEI YKKRNVRYAG DACTGDVVLF EQNVYEMFNL ASRSASGPPC GIRIVAGRIV  180
KESYGAAKQQ HTFTKWEDER ERQRILSEKH SRGTVARGNR ETRMQEKERR KKLKENRVSD  240
KNSVRNQSQS HSQYQPQKVD SLINPKKPAI PSLHTGLSSA DSRKATYATV NKPAAITQQY  300
GKPFDSTREA MRFTDSGMRQ FPPHYMHNQQ ARFPLSDARG STFVSDQIGR ANYNFPDFHT  360
RGKTAIIEEN HHPYHRMPLG SANHYIPLMH GRERWEQKQL CRHYARGRCY YGDNCKYLHD  420
LR