PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07333

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 392aa MW: 43129.9 Da PI: 5.9816

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07333	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	30.9	5.6e-10	63	108	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++++ C+ + lC +C + +H+ H +vp+ OIW07333 63 VWVCEACERAPAEFLCKADAASLCSSCDSDIHSAnllasrHHRVPI 108 689*****************************66899999877775 PP
2	CCT	69.5	8.5e-24	323	366	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ OIW07333 323 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRS 366 9*****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MLEHDTAKAI RTVACSNWAP RMCDTCRAAT CTVFCRVDSA YLCAGCDARV HTVNHVASQH 60 ERVWVCEACE RAPAEFLCKA DAASLCSSCD SDIHSANLLA SRHHRVPIMP ISGFLYGPPA 120 TQEGGFVSGR GCGGGCGSEV EMDEEEDGVG VEDEDEAASW LLLNPMKNNN ISSNNEQSNG 180 FLFGGEVDEY LDLVDCNSCD GNNNNNNQFN SGTEHYVQQN QHQQQHYGVP QKSYAGDSVV 240 PVQQHQQGHH FQLGLEFESP KAGFSYNGSI SQSVSVSSID VGIVPESTMR DVSISHSRPP 300 KGTIDLFSGP SIQIPCHLTP MDREARVLRY REKKKTRKFE KTIRYASRKA YAETRPRIKG 360 RFAKRSNAEA EVEQMFSSSL ITEVGYGIVP SF

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MLEHDTAKAI RTVACSNWAP RMCDTCRAAT CTVFCRVDSA YLCAGCDARV HTVNHVASQH  60
ERVWVCEACE RAPAEFLCKA DAASLCSSCD SDIHSANLLA SRHHRVPIMP ISGFLYGPPA  120
TQEGGFVSGR GCGGGCGSEV EMDEEEDGVG VEDEDEAASW LLLNPMKNNN ISSNNEQSNG  180
FLFGGEVDEY LDLVDCNSCD GNNNNNNQFN SGTEHYVQQN QHQQQHYGVP QKSYAGDSVV  240
PVQQHQQGHH FQLGLEFESP KAGFSYNGSI SQSVSVSSID VGIVPESTMR DVSISHSRPP  300
KGTIDLFSGP SIQIPCHLTP MDREARVLRY REKKKTRKFE KTIRYASRKA YAETRPRIKG  360
RFAKRSNAEA EVEQMFSSSL ITEVGYGIVP SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	3e-71	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW07333