PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW07192

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 652aa MW: 71747 Da PI: 7.7794

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW07192	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.9	3.7e-11	223	279	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g OIW07192 223 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 279 57*****************4444.2455535555.779999************98 PP
2	AP2	50.9	3.8e-16	322	373	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g OIW07192 322 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 373 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MVAPIGFNPD GSTDISPSFP IYEGLNTHNT HHTSQDWNTK GFGTNSSEDN YCNNNSKNLL 60 LETSCNQQQH PKLENFLGQH SFGDNHHPTY GGGTNNKASS SDLMFPNCSL QLPLTSGGDG 120 GDGGGSPRNN TSIGLSMIKS WLRNQPQQSD STNMNSSSVS QSSSSVALSL LADNVDNRES 180 SSLENNKHNP KTSSAVVDSQ GGGAVVESAV PRKSSDTFGQ RTSIYRGVTR HRWTGRYEAH 240 LWDNSCRREG QTRKGRQGGY DKEEKAARAY DLAALKYWGA ATTTNFPTSN YEKELEEMKH 300 MTRQEYVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFGTQEEA 360 AEAYDIAAIK FRGLNAVTNF DMTRYDVKSI LESTTLPIGS AAKRNLKDNS NLDLPFTTTL 420 DHNNIRSSSS VQNNSVTSHL GYGPTTTLYH GWNSSLAFQQ PHPYSQIQNN YPTYGHNSHK 480 LWCKQEQDSG DHTSHQTFND IHNQLQLGHN NSTHNFFHSD SRLNGVMGIG SSSSIDNNSS 540 SSSSVIYDGN GYGNVGGYVV PMATPTYNIG VDSNQSQRIS NGFGRDNEVK VLGFENSYST 600 SDPYHARNLY YQQTSADACN TWVPTSISTL APRTNNLALP KLLNPSHYCM NS

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MVAPIGFNPD GSTDISPSFP IYEGLNTHNT HHTSQDWNTK GFGTNSSEDN YCNNNSKNLL  60
LETSCNQQQH PKLENFLGQH SFGDNHHPTY GGGTNNKASS SDLMFPNCSL QLPLTSGGDG  120
GDGGGSPRNN TSIGLSMIKS WLRNQPQQSD STNMNSSSVS QSSSSVALSL LADNVDNRES  180
SSLENNKHNP KTSSAVVDSQ GGGAVVESAV PRKSSDTFGQ RTSIYRGVTR HRWTGRYEAH  240
LWDNSCRREG QTRKGRQGGY DKEEKAARAY DLAALKYWGA ATTTNFPTSN YEKELEEMKH  300
MTRQEYVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFGTQEEA  360
AEAYDIAAIK FRGLNAVTNF DMTRYDVKSI LESTTLPIGS AAKRNLKDNS NLDLPFTTTL  420
DHNNIRSSSS VQNNSVTSHL GYGPTTTLYH GWNSSLAFQQ PHPYSQIQNN YPTYGHNSHK  480
LWCKQEQDSG DHTSHQTFND IHNQLQLGHN NSTHNFFHSD SRLNGVMGIG SSSSIDNNSS  540
SSSSVIYDGN GYGNVGGYVV PMATPTYNIG VDSNQSQRIS NGFGRDNEVK VLGFENSYST  600
SDPYHARNLY YQQTSADACN TWVPTSISTL APRTNNLALP KLLNPSHYCM NS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	1e-122	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW07192