PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW07189
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 426aa    MW: 46836.6 Da    PI: 7.8918
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW07189genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.61.5e-113561127
              --S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
              ++++ C+++ rtG C++G++C+F+H+p
  OIW07189 35 PGEPDCSYYIRTGLCRFGATCRFNHPP 61
              5789*********************97 PP

2zf-CCCH38.91.5e-1282106327
               S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
               +++C+++++tGtCk+G++CkF+H++
  OIW07189  82 QPECQYYLKTGTCKFGATCKFHHPR 106
               799********************96 PP

3zf-CCCH38.61.8e-12128152327
               S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
               +++C +++rtG+Ck+G++CkF+H++
  OIW07189 128 EPECTYYLRTGQCKFGNTCKFHHPQ 152
               799********************97 PP

4zf-CCCH37.92.9e-12287313127
               --S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
               +++++C+f+++tG Ck+G+ C+F+H++
  OIW07189 287 PGQPECQFYMKTGDCKFGAVCRFHHPR 313
               5789*********************96 PP

5zf-CCCH38.12.5e-12333359127
               --S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
               ++++lC f++r+G+Ck+G++CkF H++
  OIW07189 333 PGEPLCVFYSRYGICKFGPSCKFDHPM 359
               589**********************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MEFHPAIHIY QQDALQQMNL TSSETMEAGT YPQRPGEPDC SYYIRTGLCR FGATCRFNHP  60
PNRKLAIATA RMKGEFPERI GQPECQYYLK TGTCKFGATC KFHHPRDQAG MSGRIALNIL  120
GYPLRPNEPE CTYYLRTGQC KFGNTCKFHH PQPSNMMLSL RDSPVYPTAQ SPTTPGPQPY  180
AGGIANWSRT SYIASPRWQG PSSYTPLILP QGVVSVPGWS AYSGQMGSIP TSDNPQQTIG  240
NGQTYGTSRQ DEVANAGTHG AYTQFRSGSV PVGFYALQGE NIFPERPGQP ECQFYMKTGD  300
CKFGAVCRFH HPRERLVPVP DCVLSPIGLP LRPGEPLCVF YSRYGICKFG PSCKFDHPMG  360
IFTYNLSASP STEAPGRRLL GSSSGTAALN LSSEGHAESG SAKPRRLSIS ETRQVPSDDD  420
DIDDDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.11e-178C3H family protein