PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW07008 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 295aa MW: 33452.3 Da PI: 5.4883 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 73 | 121 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ ++k++g OIW07008 73 YRGIRLRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARKIRG 121 9*******.**********954...4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MCGGAIIADF IPHRVNRRIT ASEIWPNSFG ANQNDFDLDS SQQQSTTVKR TQPSPVVTEQ 60 VEKPVKRQRK NLYRGIRLRP WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDKEARKIR 120 GKKAKLNFPN EDDEYSIQLR PNPPRLPPTQ PKKTPLFLQE PRHCDSLNNA PIKNLNWEFG 180 YDLNQAGEIP SHHVTDPVII SGDENSGSAG SEGAYSITVN ESGCFSGEVN VKEVSEVKDA 240 MNEGQGLKDE VLKITDELIS YENYMKFFEI PYYVDQSTEP NNVHENLVGD LWSFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 6e-44 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW07008 |