PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW06990 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 26758.8 Da PI: 7.8527 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.5 | 6.5e-08 | 17 | 61 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 rWT d+l+ +a + + +W++Ia+ ++ g+++ ++k ++ OIW06990 17 SRWTHNQDKLFERALLVVPEDapdRWEKIAEQVP-GKSAVEVKVHY 61 59********************************.**********9 PP | |||||||
2 | Myb_DNA-binding | 46 | 1.2e-14 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky OIW06990 122 PWTEEEHRLFLVGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKY 166 8*******************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MFHGCTTMPT RWPSQPSRWT HNQDKLFERA LLVVPEDAPD RWEKIAEQVP GKSAVEVKVH 60 YDDLVHDLFE IESGRVSVPE YTDESVVAAG GSGRLSSWDS SNQISFGSKP KHGDNEKKKG 120 TPWTEEEHRL FLVGLSKFGK GDWRSISRNV VVTRTPTQVA SHAQKYFIRQ TSAKKERKRS 180 SIHDITTVDT NSVSAPMDQN WVPPPGGPMQ QSQEMQYNPI NNLHVQMGGF GYSNYGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G04760.1 | 5e-79 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW06990 |