PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW06934 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 203aa MW: 22477.5 Da PI: 5.0122 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 81.7 | 1.1e-25 | 4 | 105 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C++lr++C++dCv++p++ p++q++++ +++k++G++ ++l++a+pe r+d+++sl+ eA+ r+ +P yG +g++++++ + +++++e++l OIW06934 4 SCNGCRTLRKACNDDCVFRPCLewinsPESQANATMFLAKFYGRTAFTNLISAAPEALRPDVFKSLLREACGRLLNPTYGLIGLVWTGSLDQCEAAVEAVL 104 6********************************************************************************************99999877 PP DUF260 97 l 97 OIW06934 105 N 105 5 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 203 aa Download sequence |
MKVSCNGCRT LRKACNDDCV FRPCLEWINS PESQANATMF LAKFYGRTAF TNLISAAPEA 60 LRPDVFKSLL REACGRLLNP TYGLIGLVWT GSLDQCEAAV EAVLNGSWIN GVTAFDWPAT 120 GITNYGGAEN VIAPGDIQHV PRVRNMGERT RFNRAMRTMN NPTTQVNMVD SPQNESMETV 180 EQPLNQFAVE NELNLELTLT FHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68510.1 | 6e-52 | LBD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW06934 |