PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06933

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 410aa MW: 46687.3 Da PI: 6.5076

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06933	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.8	2.6e-09	18	59	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +r C+++ k+++++C ++ +lC+ C ++ H+ H+ OIW06933 18 ARACDNCITKRARWYCAADDAFLCQACDSSVHSAnplarrHE 59 578*****************************6567777776 PP
2	CCT	68.1	2.3e-23	357	400	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a OIW06933 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 400 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MSSTSTKNVP NPVNGKTARA CDNCITKRAR WYCAADDAFL CQACDSSVHS ANPLARRHER 60 LRLNTASFKS SNELNNYAPP SWHHKKARTP RHGNQHSKHS SKNINNSFHL VPEVGSDEVN 120 YNDENEEQLL FRVPIFEPLC STPSSITSHE IVEKSKVPWD YNVNYHEGVE SLHGGFVPSD 180 IELYDFAADV ESLLGQGLEN ECIGMEELGL VDIKEESLEC SVGSGGKKVM FDEEASHEME 240 NKMMMIEMER ESFEFSYDYG SHEKVKEKLD LDVVKDVEDG GEVKENDEGK RKKILLQLDY 300 EGVISAWDSQ KCPWTTGDKP NLDPDECWPQ CMGTCGKELH YPHGRFGCNP VVADGGREAR 360 VSRYREKRRT RLFSKKIRYE VRKLNAEKRP RMKGRFVKRA SFVAPTFPHC

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MSSTSTKNVP NPVNGKTARA CDNCITKRAR WYCAADDAFL CQACDSSVHS ANPLARRHER  60
LRLNTASFKS SNELNNYAPP SWHHKKARTP RHGNQHSKHS SKNINNSFHL VPEVGSDEVN  120
YNDENEEQLL FRVPIFEPLC STPSSITSHE IVEKSKVPWD YNVNYHEGVE SLHGGFVPSD  180
IELYDFAADV ESLLGQGLEN ECIGMEELGL VDIKEESLEC SVGSGGKKVM FDEEASHEME  240
NKMMMIEMER ESFEFSYDYG SHEKVKEKLD LDVVKDVEDG GEVKENDEGK RKKILLQLDY  300
EGVISAWDSQ KCPWTTGDKP NLDPDECWPQ CMGTCGKELH YPHGRFGCNP VVADGGREAR  360
VSRYREKRRT RLFSKKIRYE VRKLNAEKRP RMKGRFVKRA SFVAPTFPHC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	368	384	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	5e-94	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW06933