PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW06883 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 164aa MW: 18375.8 Da PI: 7.2044 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 97.9 | 1e-30 | 2 | 102 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C+vlr++C++dC+l+ +f p++q++++ +v+k+FG+++++++++++p+++r+++++slvyeA r+ +Pv+G+vg++++++++l+ql +e +l OIW06883 2 SCNGCRVLRKGCSDDCMLRHCFlwienPQAQAHATLFVAKFFGRATLMSFISSVPTNQRSALFESLVYEAVGRTINPVNGVVGLLWSGNWHLCQLGVEKVL 102 6*********************************************************************************************9988766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MSCNGCRVLR KGCSDDCMLR HCFLWIENPQ AQAHATLFVA KFFGRATLMS FISSVPTNQR 60 SALFESLVYE AVGRTINPVN GVVGLLWSGN WHLCQLGVEK VLKGGSLLNP NPHHHDEEEV 120 ERVMVSHQAS QEESETTTFG SSTPQVDSDS HQKTQRRKLL TLFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49940.1 | 7e-58 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW06883 |