PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW06721
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 368aa    MW: 41087 Da    PI: 8.3018
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW06721genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.3e-24118219199
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f k+lt+sd+++ g +++p+ +ae++        +++ +  t++ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF   + +++ l+v
  OIW06721 118 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TIIAKDVHGQCWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAENGDLCV 214
               89****************************986445444..8************************************************..4488999** PP

               EEE-S CS
        B3  95 kvfrk 99 
               +++r+
  OIW06721 215 GIRRA 219
               **997 PP
2Auxin_resp115.25.8e-38282364283
  Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 ++ a ++++FevvY+Prast+eF+vkv++v++a++++++ GmRfkm fetedss++++ +Gt+++v+ +dp++Wp+S+Wr+L+
    OIW06721 282 VTCAVNGKPFEVVYYPRASTPEFCVKVSSVRAAMQIQWCSGMRFKMPFETEDSSRISWfMGTISSVQVSDPIHWPDSPWRLLQ 364
                 6678899**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MFMVNSMERR SSERCLDSQL WHACAGAMVQ MPPLNTKVFY FPQGHAEHAH GKVDFGQTRV  60
PPLIPCRVSA MKFMADPDTD EVFVKMRLNP LRENELNFED DCFLGKNGVV SQDKPASFAK  120
TLTQSDANNG GGFSVPRYCA ETIFPRLDYS AEPPVQTIIA KDVHGQCWKF RHIYRGTPRR  180
HLLTTGWSNF VNQKKLVAGD SIVFLRAENG DLCVGIRRAK KGGIGGGTEL SSCWNNNHAA  240
PPLFGGGSGF LCGNEKNNSL LMRKGSHEFI GRVEAESVVE AVTCAVNGKP FEVVYYPRAS  300
TPEFCVKVSS VRAAMQIQWC SGMRFKMPFE TEDSSRISWF MGTISSVQVS DPIHWPDSPW  360
RLLQVYTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.11e-166ARF family protein