PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW06628 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23188.7 Da PI: 4.521 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.2 | 3e-16 | 47 | 94 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G r ++ +g+Wv+eIr+p++ +kr++lg++ t+e+Aa+a++ a+++l+g OIW06628 47 YRGTR-CR-SGKWVCEIREPRK---TKRIWLGTYQTPEMAAAAYDVAALALKG 94 66665.44.699*******843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MDDQNPQPPR PPSIQVPQFS ISSSSSATPT PTTPIPTSGD PNATVRYRGT RCRSGKWVCE 60 IREPRKTKRI WLGTYQTPEM AAAAYDVAAL ALKGPNTPLN FPNSILSYPI PRSLSPADIC 120 AAASAAAQAR IVTPQQHQQQ LETQNPCGGT GVNDESGSSS AQAPQEYIDE DELLNMPNLL 180 NDMARGMQVS PPRMPSFSSD DDSAANSDID NLWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12630.1 | 6e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW06628 |