PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW06542 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27547.3 Da PI: 8.4458 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.5 | 1.4e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s OIW06542 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 77.4 | 3.7e-26 | 81 | 170 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +++ ++s+++e+ kLk++ e+Lqr+qR+llGedL++L+ k+L+qLe+qL++slk+ ++++l+q+++lq+ke++l e+n+ L++klee OIW06542 81 VNKPSKELEQSSYREYLKLKARFESLQRTQRNLLGEDLGPLNTKDLEQLERQLDSSLKH-----TQFMLDQLSDLQNKEQMLVEANRGLTMKLEE 170 5566777899***********************************************87.....8***************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSC 60 TSGMLKTLER YQKCSYGAVE VNKPSKELEQ SSYREYLKLK ARFESLQRTQ RNLLGEDLGP 120 LNTKDLEQLE RQLDSSLKHT QFMLDQLSDL QNKEQMLVEA NRGLTMKLEE INSRNQYRQW 180 EDAEQSMQYG AQNPHSQGFF QPLECNPTLQ IGYNSVASDQ LTAATQGQQV NGFIPGWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-120 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW06542 |