PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06152

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 350aa MW: 40003.1 Da PI: 5.463

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06152	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.9	7.6e-11	52	108	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n ++k+ + g +++++ Aa ++ a++k++g OIW06152 52 SIYRGVTRHRWTGRFEAHLWDkSSWNSiQNKKGRQGAYDSEDAAAHTYDLAALKYWG 108 57*****************77779998888888*99***********98 PP
2	AP2	51	3.6e-16	151	202	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa a++ a+ + +g OIW06152 151 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYKTQEEAAIAYDMAAIEHRG 202 89**99*******99644...4********************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MKRSHASSCS SSSSCNVGFE TPIEKRRPKQ PRSNVKSQQC NNQNQTTGRR SSIYRGVTRH 60 RWTGRFEAHL WDKSSWNSIQ NKKGRQGAYD SEDAAAHTYD LAALKYWGNA ATLNFPIETY 120 SKDLEEMNKI TREEFLANLR RQSSGFSRGV SKYRGVARHH HNGRWEARIG RVCGNKYLYL 180 GTYKTQEEAA IAYDMAAIEH RGLNAVTNFD ISNYIDKIKM NNEPSQEAET QTQTAPTSID 240 SEEVEQKNTP QPQPEIVDKE PQQIQYTNVV LSEESSQVIP MDHVFEQDMP WNFMDTNLSQ 300 FQDIDLGFCE KEDLLSMFDG KGFEDDIDFL FNTEPGAGDF NFNAILDSIV

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MKRSHASSCS SSSSCNVGFE TPIEKRRPKQ PRSNVKSQQC NNQNQTTGRR SSIYRGVTRH  60
RWTGRFEAHL WDKSSWNSIQ NKKGRQGAYD SEDAAAHTYD LAALKYWGNA ATLNFPIETY  120
SKDLEEMNKI TREEFLANLR RQSSGFSRGV SKYRGVARHH HNGRWEARIG RVCGNKYLYL  180
GTYKTQEEAA IAYDMAAIEH RGLNAVTNFD ISNYIDKIKM NNEPSQEAET QTQTAPTSID  240
SEEVEQKNTP QPQPEIVDKE PQQIQYTNVV LSEESSQVIP MDHVFEQDMP WNFMDTNLSQ  300
FQDIDLGFCE KEDLLSMFDG KGFEDDIDFL FNTEPGAGDF NFNAILDSIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-105	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW06152