PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW06079

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 443aa MW: 48313.6 Da PI: 7.012

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW06079	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108	1.4e-33	37	148	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.............. 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++++ +++++ ++++++++++++ OIW06079 37 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPAWNPTAT--TEQQQQQQQQQINeilrrephaaedgl 135 79**************************************************************77777555..333333333344445666664444444 PP TCP 89 ............k 89 OIW06079 136 igssscrvtaatT 148 4443333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGEQQQQTPT TRGMRSTPTA GVGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDQLAEL PAWNPTATTE QQQQQQQQQI 120 NEILRREPHA AEDGLIGSSS CRVTAATTTV VSSGGRISED FQQQQYGEEN NNSNKYNSGG 180 SGFLPPSMDT EIADTIKSFF PMVAAAETTT TSFHNYSTPP DLLSRTTSAA ANHHNHQQDL 240 RLSLQSFQDP VLLHHHHQQQ QNQTQNQNQQ MLFTGTNTLG FDGGGSSGWS EHHHHGEEQE 300 HDHGRFHRMV AWNAAVADAA NSGHGGGFVF NSPPPSTVAP AGMFGHHGQY FSQRGPLQSS 360 NTPSIRAWID PNPYAAAATV AAASHPHYHH HYLSPAIHQA SVSGFASPSS GFSGFRIPAR 420 IQGEEEHDGV SDKPSSASSD SRH

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGEQQQQTPT TRGMRSTPTA GVGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KAAIDQLAEL PAWNPTATTE QQQQQQQQQI  120
NEILRREPHA AEDGLIGSSS CRVTAATTTV VSSGGRISED FQQQQYGEEN NNSNKYNSGG  180
SGFLPPSMDT EIADTIKSFF PMVAAAETTT TSFHNYSTPP DLLSRTTSAA ANHHNHQQDL  240
RLSLQSFQDP VLLHHHHQQQ QNQTQNQNQQ MLFTGTNTLG FDGGGSSGWS EHHHHGEEQE  300
HDHGRFHRMV AWNAAVADAA NSGHGGGFVF NSPPPSTVAP AGMFGHHGQY FSQRGPLQSS  360
NTPSIRAWID PNPYAAAATV AAASHPHYHH HYLSPAIHQA SVSGFASPSS GFSGFRIPAR  420
IQGEEEHDGV SDKPSSASSD SRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-51	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW06079