PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05726

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 540aa MW: 60266 Da PI: 6.4363

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05726	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.7	1.9e-10	165	221	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+ ++ a++k++g OIW05726 165 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARSYDLAALKYWG 221 57*****************5444.2455536655.779999************98 PP
2	AP2	47.1	5.9e-15	266	315	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OIW05726 266 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 315 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MNSNNWLSFP LSPTHSSLPA HDLQATQYHQ FSLGLVNENM ENPFQNHDWN HFNTHTNDEV 60 PKVADFLGVS RSENQSDLAA MNEIQPNESE YLFTNNSLVP MQNTVVTSSS NYEYQECGNS 120 NLQSLTLSMG SGKDLSSETS GDNSTKTVEA APSRRTLDTF GQRTSIYRGV TRHRWTGRYE 180 AHLWDNSCRR EGQSRKGRQG GYDKEEKAAR SYDLAALKYW GTSTTTNFPI SNYEKEIDEM 240 KHMTRQEFVA SIRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTEE 300 EAAEAYDIAA IKFRGLNAVT NFDMNRYDVK AILESNTLPI GGGAAKRLKE AQALESSRKR 360 DQEMLALGSN FQYGTSSSSS RLQPYPLMQH FEQPQPLLTL QNHDMSHHFS QDPSTLHQSY 420 LQTQLQLHQQ SSSSYIHQSA QNAQFYNSYV QNHHPALLHG MMNMGSSSSS SLMENDNNTI 480 GGFTGNVNAV GSAEELGLVK VDYDIDMSSG SYGGWSAEGT ESMQASTAGG GGGVFNMWSE

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MNSNNWLSFP LSPTHSSLPA HDLQATQYHQ FSLGLVNENM ENPFQNHDWN HFNTHTNDEV  60
PKVADFLGVS RSENQSDLAA MNEIQPNESE YLFTNNSLVP MQNTVVTSSS NYEYQECGNS  120
NLQSLTLSMG SGKDLSSETS GDNSTKTVEA APSRRTLDTF GQRTSIYRGV TRHRWTGRYE  180
AHLWDNSCRR EGQSRKGRQG GYDKEEKAAR SYDLAALKYW GTSTTTNFPI SNYEKEIDEM  240
KHMTRQEFVA SIRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTEE  300
EAAEAYDIAA IKFRGLNAVT NFDMNRYDVK AILESNTLPI GGGAAKRLKE AQALESSRKR  360
DQEMLALGSN FQYGTSSSSS RLQPYPLMQH FEQPQPLLTL QNHDMSHHFS QDPSTLHQSY  420
LQTQLQLHQQ SSSSYIHQSA QNAQFYNSYV QNHHPALLHG MMNMGSSSSS SLMENDNNTI  480
GGFTGNVNAV GSAEELGLVK VDYDIDMSSG SYGGWSAEGT ESMQASTAGG GGGVFNMWSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW05726