PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW05448 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | CO-like | ||||||||
Protein Properties | Length: 336aa MW: 37817.1 Da PI: 6.3125 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 16.4 | 1.9e-05 | 20 | 54 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.H 37 r+C++++ + fC+ ++ +lC++C + H H OIW05448 20 RICDTCHAATCTVFCRVDSAYLCAKCDTRVHTAnH 54 79******99*******************994453 PP | |||||||
2 | zf-B_box | 28.9 | 2.4e-09 | 62 | 107 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +++ ++ + C+ + llC +C ++H+ H +vp+ OIW05448 62 VWVCEACQHAPAAFLCKADAALLCSSCDAYIHSAnsltsrHHRVPI 107 689*****************************66889999877775 PP | |||||||
3 | CCT | 71.1 | 2.7e-24 | 267 | 310 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpRvKGrF+k++ OIW05448 267 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRVKGRFAKRT 310 9*****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MLEDDTKAIR TAGCNNWPSR ICDTCHAATC TVFCRVDSAY LCAKCDTRVH TANHMKSRHE 60 RVWVCEACQH APAAFLCKAD AALLCSSCDA YIHSANSLTS RHHRVPILPI SGFLHGPPNT 120 TIQDDGFESG HKEDEGVDVE DENEAASWLL LNPVKNNSSN NTNEQSNGFM FDEYLDQVDY 180 NSCGDNYRQQ NQHQQQGQNF QLGLDFDQSP RFSYNGSIAQ SVSVSSIDVV IVPESTMRDV 240 LISHPSPTQG TIDLLYGPSC HLTPMDREAR VLRYREKKKT RKFEKTIRYA SRKAYAETRP 300 RVKGRFAKRT DVEAEVDQMF SSSLITEVEY GIVPSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02380.1 | 3e-73 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW05448 |