PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW05427 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 27879.7 Da PI: 10.2146 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.8 | 3.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ +qvtfskRr+g+lKKA+E+SvLCd++va+i+fs++gkl+eyss OIW05427 9 KRIENKTSQQVTFSKRRTGLLKKAHEISVLCDTQVALIMFSTKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 87.7 | 2.3e-29 | 81 | 169 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++++ +e+++ ++ kL ++ e L+r++R++ G dL++L+lkeLq+Le+qL+++lk+iR++Kn++l ++i+e+qk+ + lqe+n +L k+ OIW05427 81 ANNESQENWSFDYFKLTAKAEVLERNIRNFAGYDLDPLNLKELQNLEHQLDTALKRIRTRKNQVLNQSISEMQKRTRTLQEQNSMLAKM 169 5677789*******************************************************************************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGRGRVQLKR IENKTSQQVT FSKRRTGLLK KAHEISVLCD TQVALIMFST KGKLFEYSSE 60 PSVENVLERY ERHAHTIHAG ANNESQENWS FDYFKLTAKA EVLERNIRNF AGYDLDPLNL 120 KELQNLEHQL DTALKRIRTR KNQVLNQSIS EMQKRTRTLQ EQNSMLAKMK EKEKTLTENS 180 QPETLGQSSS PFNLSSQKQL LRQRQVPCLT LSGTLQARAS PEEAVGAQTA AAGGGNTLIP 240 PWMLHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-74 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW05427 |