PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW05248

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 336aa MW: 38408 Da PI: 8.6936

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW05248	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.7e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++q+G g W+ ++ g++R++k+c++rw +yl OIW05248 16 KGPWTPEEDQKLIDYIQQHGHGKWRILPKNAGLKRCGKSCRLRWANYL 63 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.7e-17	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e +++++ +G++ W+tIa ++ gRt++++k++w+++ OIW05248 69 RGKFSLEEEETIIQLHSVMGNK-WSTIATNLP-GRTDNEIKNYWNTH 113 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MMTKSNSSSE NNGLKKGPWT PEEDQKLIDY IQQHGHGKWR ILPKNAGLKR CGKSCRLRWA 60 NYLRPDIKRG KFSLEEEETI IQLHSVMGNK WSTIATNLPG RTDNEIKNYW NTHIKKKLLN 120 LGIDPITHTP HYEVLQHSSI LNSLYSPQLN YSSSPFRIDC SSSVVNNQSQ LLSLLTTFLS 180 YQNRNQDIMN HNFHQNQIGI STSSPLLQNQ SQCSHPMQLN SIQNFRSNQV QVQENHQPCA 240 TSNDPLHVES QLMKIKLENQ ISSIVATPFS HQDNTSIPNL WQYEGGYIPD QQQQPQSIST 300 MQSLSLPKFN SIVNNLLENQ ISSNNNEGMP NFNRIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-78	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW05248