PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW05205 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | C3H | ||||||||
Protein Properties | Length: 728aa MW: 79792.1 Da PI: 6.6847 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.3 | 2.4e-07 | 307 | 327 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C++f++ G C++Gd C +aHg OIW05205 307 PCPDFRK-GACRRGDMCEYAHG 327 8******.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 728 aa Download sequence |
MSHELDPLKQ LATSPTLSPN LISSSEPNSN KMNHLTIDTD DSFASLLELA ANNDVEGFKR 60 LIECDPSSVD EVGVWYSRRK GSKQMVNEQR TPLMIAATYG SIEIMKMILS LSDADINRSC 120 GLDKSTALHC AASGGAENAV DAMKLLLAAG ADPNSVDANG HRPADVIVFP PKLQYVKNSL 180 EQLLQTDDSI AGCNLRVITT SSFNSYSPPL SNSPENGSPS ASDFQLKLKS NDVPISSASE 240 KKEYPIDPSL PDIKNSIYST DEFRMYSFKV RPCSRAYSHD WTECPFVHPG ENARRRDPRK 300 YHYSCVPCPD FRKGACRRGD MCEYAHGVFE CWLHPAQYRT RLCKDGINCS RRVCFFAHTA 360 EELRPLYIST GSAVPSPRSS TSSAMDFAAA MSMLPGSPSS MSVMSPSPFT PPMSPSANGM 420 HSSVPWPQPN VPALHLPGSN LQSSRLRSSL HARDIPMDGF DSFSDYDQQQ QLLNELSCLS 480 PQHPMNSNNL NRSGRMKPLT PSNLDDLFSA ESSSPRFTDG SLASTVFSPT HKSAVFNQFQ 540 QHQSMLSPVN SNFSPKNVEH PLLHSASFGV QSPGRMSPRN MEPISPMNSR MSMLAQHEKQ 600 QQFRSLSSRD LGSNSATAAS ANSWSRWGSP NGRAAGAEEF NKHHRRSSSF ELGNNGEEPD 660 LSWVQSLVKE SPTEIKEKWT TNVPTVAAAG SSSEGSNISA SQMNSVDHAV LGAWLEQMQL 720 DHLVAQQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41900.1 | 0.0 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW05205 |