PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW05205
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 728aa    MW: 79792.1 Da    PI: 6.6847
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW05205genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.4e-07307327526
               --SGGGGTS--TTTTT-SS-SS CS
   zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
               +C++f++ G C++Gd C +aHg
  OIW05205 307 PCPDFRK-GACRRGDMCEYAHG 327
               8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MSHELDPLKQ LATSPTLSPN LISSSEPNSN KMNHLTIDTD DSFASLLELA ANNDVEGFKR  60
LIECDPSSVD EVGVWYSRRK GSKQMVNEQR TPLMIAATYG SIEIMKMILS LSDADINRSC  120
GLDKSTALHC AASGGAENAV DAMKLLLAAG ADPNSVDANG HRPADVIVFP PKLQYVKNSL  180
EQLLQTDDSI AGCNLRVITT SSFNSYSPPL SNSPENGSPS ASDFQLKLKS NDVPISSASE  240
KKEYPIDPSL PDIKNSIYST DEFRMYSFKV RPCSRAYSHD WTECPFVHPG ENARRRDPRK  300
YHYSCVPCPD FRKGACRRGD MCEYAHGVFE CWLHPAQYRT RLCKDGINCS RRVCFFAHTA  360
EELRPLYIST GSAVPSPRSS TSSAMDFAAA MSMLPGSPSS MSVMSPSPFT PPMSPSANGM  420
HSSVPWPQPN VPALHLPGSN LQSSRLRSSL HARDIPMDGF DSFSDYDQQQ QLLNELSCLS  480
PQHPMNSNNL NRSGRMKPLT PSNLDDLFSA ESSSPRFTDG SLASTVFSPT HKSAVFNQFQ  540
QHQSMLSPVN SNFSPKNVEH PLLHSASFGV QSPGRMSPRN MEPISPMNSR MSMLAQHEKQ  600
QQFRSLSSRD LGSNSATAAS ANSWSRWGSP NGRAAGAEEF NKHHRRSSSF ELGNNGEEPD  660
LSWVQSLVKE SPTEIKEKWT TNVPTVAAAG SSSEGSNISA SQMNSVDHAV LGAWLEQMQL  720
DHLVAQQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein