PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04916

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 564aa MW: 62830.8 Da PI: 6.6755

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04916	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.3	1.4e-11	235	291	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g OIW04916 235 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 291 78*****************433.44555535555.779999************98 PP
2	AP2	48.1	2.9e-15	334	385	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OIW04916 334 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 385 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MNNWLGFSLT PHLRIDEDFG RENQDHGEGR EPYPHHLSVM PLQSDGSLCV ADSFRHSAPH 60 EEWRYDNGGN SSEEGPKLED FLGCYSNSSS LAETKVFCQQ DITTHHNQNQ NNNNISKINN 120 VNIAEENNLT NQSSMIQNFH AYNDNPHGLI HSNGMYKSWL AQTHFSDAAK ASSAEANGCN 180 FQSLNLTMSP IVQNSVGAIS PLQVDDDSRK RSILKIQGRE PVPRKSIDTF GQRTSQYRGV 240 TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG GYDKEEKAAR AYDLAALKYW GATTHINFPL 300 STYEKELEEM KNMTRQEFVA NLRRKSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD 360 LYLGTFSTQE EAAEAYDIAA IKFRGTSAVT NFDISRYDVK RICSSSTLIA GNLAKRSPKD 420 TAPAAAAVTE DFNPCGSSTP SQPTPLAITD CEHIDKFSNA VWTSNSDEQV VNESENANNV 480 SESSKQVSPS NKNVLNPQSP KCSVGLPNEF GVSGADYGHG YFTLSGPKYD DDDRNDDNGG 540 RTDNNRLGNL GLVNQVPMFA LWNE

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MNNWLGFSLT PHLRIDEDFG RENQDHGEGR EPYPHHLSVM PLQSDGSLCV ADSFRHSAPH  60
EEWRYDNGGN SSEEGPKLED FLGCYSNSSS LAETKVFCQQ DITTHHNQNQ NNNNISKINN  120
VNIAEENNLT NQSSMIQNFH AYNDNPHGLI HSNGMYKSWL AQTHFSDAAK ASSAEANGCN  180
FQSLNLTMSP IVQNSVGAIS PLQVDDDSRK RSILKIQGRE PVPRKSIDTF GQRTSQYRGV  240
TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG GYDKEEKAAR AYDLAALKYW GATTHINFPL  300
STYEKELEEM KNMTRQEFVA NLRRKSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD  360
LYLGTFSTQE EAAEAYDIAA IKFRGTSAVT NFDISRYDVK RICSSSTLIA GNLAKRSPKD  420
TAPAAAAVTE DFNPCGSSTP SQPTPLAITD CEHIDKFSNA VWTSNSDEQV VNESENANNV  480
SESSKQVSPS NKNVLNPQSP KCSVGLPNEF GVSGADYGHG YFTLSGPKYD DDDRNDDNGG  540
RTDNNRLGNL GLVNQVPMFA LWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-127	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW04916