PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW04788 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 106aa MW: 12083 Da PI: 10.5256 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.4 | 6.2e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s OIW04788 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSQRGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 48.5 | 3.7e-17 | 59 | 103 | 34 | 78 |
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 + R+llGe+L+s+s+ eLq++e+qLe+s++++R++K ++++ ie OIW04788 59 SSRKLLGEGLGSCSIDELQEIEKQLERSVSNVRARKVSVIKNPIE 103 56***************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MVRGKTQLKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSQ RGKLYEFASS 60 RKLLGEGLGS CSIDELQEIE KQLERSVSNV RARKVSVIKN PIEFYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 8e-49 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW04788 |