PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04426

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 1740aa MW: 193679 Da PI: 6.3384

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04426	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.5	1e-22	379	480	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++ OIW04426 379 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLLLG 476 99***************************9777666.49********************************************..8899999* PP EE-S CS B3 96 vfrk 99 ++r+ OIW04426 477 IRRA 480 *997 PP
2	B3	32.3	1.8e-10	1088	1133	52	99
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ OIW04426 1088 STGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLLLGIRRA 1133 3558889***********************..8899999**997 PP
3	Auxin_resp	119.6	2.5e-39	505	588	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+v+YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k OIW04426 505 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 588 79*******************************9789****************************************985 PP
4	Auxin_resp	119.6	2.5e-39	1158	1241	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+v+YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k OIW04426 1158 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 1241 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1740 aa Download sequence
MGHKSVLLIC GDYMEDYEAM VPFQALQAYG LTVHAVCPGK KVGDLCRTAI HQDSVEASSY 60 DGLVLPGGRA PEYLAHNASV VVLVTKFSDV GKPITSICHS QLILAAAGAL KGRKCTAYPP 120 VGPTLVAAGA HWVQPESLAT IVVDGNLISA PTYFGHREFI HHFVKALGGT ITGSNKKILF 180 LCGDYMEDYE VAVPFQSLQA LGCHVDAVCP EKKAGDICPT AVHDFEGDQT YSEKPGHDFV 240 LTATYDDLDA SSYDALVIPG GRSPEYLALN ESVITMVKHF METKKPVASI CHGQLILAAA 300 GVLKVSATTN REIDGHIPNY PSLSPQLVCQ LHNLTMHVDV ETDEVYAQMT LQPLTPQEQK 360 DAFIPMELGI PSKQPSNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDF SLQPPAQELI 420 ARDLHDVEWK FRHIFRGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA 480 NRPQTVMPSS VLSSDSMHIG LLAAAAHAAA TNSCFTVFYN PRASPSEFVI PLSKYIKAVY 540 HTRVSVGMRF RMLFETEESS VRRYMGTITG ISDLDPVRWP NSHWRSVKVG WDESTAGERQ 600 PRVSLWEIEP LTTFPMYPSL FPLRLKRPWH PGSSSFLETQ WNKFPRFHCF EDTSLFPVFT 660 KGHVFTDGRD ETTNGLMWLR GGPGDQGVNS LNFQGAGLFP WMQQRLDPTM LGNDQNQQYQ 720 AMSAAAGLQN LGSGDLLRQQ MMNFQQPFYL QQSGNSNPPL QLQKQQVIQQ SVSPNILQPQ 780 AQVLTENLSQ QLLLKPPINR EDQAQQQQHT YQDSLLIQTE QLHQRQHSNL PSPSYSKPDF 840 FDSSMKLSAA SVSPGQNMLG SLCPEGSGNL LNLSRSAQSM LTEQQLQQQS WALECTPLQV 900 IPFGNSVSHV QYSGKDATMV SPHCNSDSQN STLFGVNIDS SGLLLPTTVP RYITSSADTD 960 SSTMPLVESG FQDSLYGCMQ DSSELLQSPG QLDPQNQTRT FVKVYKSGSV GRSLDISRFN 1020 SYHELREELA QMFAIEGKLE DPLRSGWQLV FVDRENDVLL LGDDPWEYSE NVRASGAILQ 1080 RSGQRMNSTG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLLLGI RRANRPQTVM 1140 PSSVLSSDSM HIGLLAAAAH AAATNSCFTV FYNPRASPSE FVIPLSKYIK AVYHTRVSVG 1200 MRFRMLFETE ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE 1260 IEPLTTFPMY PSLFPLRLKR PWHPGSSSFL ETQWNKFPRF HCFEDTSLFP VFTKGHVFTD 1320 GRDETTNGLM WLRGGPGDQG VNSLNFQGAG LFPWMQQRLD PTMLGNDQNQ QYQAMSAAAG 1380 LQNLGSGDLL RQQMMNFQQP FYLQQSGNSN PPLQLQKQQV IQQSVSPNIL QPQAQVLTEN 1440 LSQQLLLKPP INREDQAQQQ QHTYQDSLLI QTEQLHQRQH SNLPSPSYSK PDFFDSSMKL 1500 SAASVSPGQN MLGSLCPEGS GNLLNLSRSA QSMLTEQQLQ QQSWALECTP LQVIPFGNSV 1560 SHVQYSGKDA TMVSPHCNSD SQNSTLFGVN IDSSGLLLPT TVPRYITSSA DTDSSTMPLV 1620 ESGFQDSLYG CMQDSSELLQ SPGQLDPQNQ TRTFVKVYKS GSVGRSLDIS RFNSYHELRE 1680 ELAQMFAIEG KLEDPLRSGW QLVFVDREND VLLLGDDPWE SFVNNVWYIK ILSPEDIQKM

Sequence ? help Back to Top

Protein Sequence Length: 1740 aa Download sequence

MGHKSVLLIC GDYMEDYEAM VPFQALQAYG LTVHAVCPGK KVGDLCRTAI HQDSVEASSY  60
DGLVLPGGRA PEYLAHNASV VVLVTKFSDV GKPITSICHS QLILAAAGAL KGRKCTAYPP  120
VGPTLVAAGA HWVQPESLAT IVVDGNLISA PTYFGHREFI HHFVKALGGT ITGSNKKILF  180
LCGDYMEDYE VAVPFQSLQA LGCHVDAVCP EKKAGDICPT AVHDFEGDQT YSEKPGHDFV  240
LTATYDDLDA SSYDALVIPG GRSPEYLALN ESVITMVKHF METKKPVASI CHGQLILAAA  300
GVLKVSATTN REIDGHIPNY PSLSPQLVCQ LHNLTMHVDV ETDEVYAQMT LQPLTPQEQK  360
DAFIPMELGI PSKQPSNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDF SLQPPAQELI  420
ARDLHDVEWK FRHIFRGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA  480
NRPQTVMPSS VLSSDSMHIG LLAAAAHAAA TNSCFTVFYN PRASPSEFVI PLSKYIKAVY  540
HTRVSVGMRF RMLFETEESS VRRYMGTITG ISDLDPVRWP NSHWRSVKVG WDESTAGERQ  600
PRVSLWEIEP LTTFPMYPSL FPLRLKRPWH PGSSSFLETQ WNKFPRFHCF EDTSLFPVFT  660
KGHVFTDGRD ETTNGLMWLR GGPGDQGVNS LNFQGAGLFP WMQQRLDPTM LGNDQNQQYQ  720
AMSAAAGLQN LGSGDLLRQQ MMNFQQPFYL QQSGNSNPPL QLQKQQVIQQ SVSPNILQPQ  780
AQVLTENLSQ QLLLKPPINR EDQAQQQQHT YQDSLLIQTE QLHQRQHSNL PSPSYSKPDF  840
FDSSMKLSAA SVSPGQNMLG SLCPEGSGNL LNLSRSAQSM LTEQQLQQQS WALECTPLQV  900
IPFGNSVSHV QYSGKDATMV SPHCNSDSQN STLFGVNIDS SGLLLPTTVP RYITSSADTD  960
SSTMPLVESG FQDSLYGCMQ DSSELLQSPG QLDPQNQTRT FVKVYKSGSV GRSLDISRFN  1020
SYHELREELA QMFAIEGKLE DPLRSGWQLV FVDRENDVLL LGDDPWEYSE NVRASGAILQ  1080
RSGQRMNSTG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLLLGI RRANRPQTVM  1140
PSSVLSSDSM HIGLLAAAAH AAATNSCFTV FYNPRASPSE FVIPLSKYIK AVYHTRVSVG  1200
MRFRMLFETE ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE  1260
IEPLTTFPMY PSLFPLRLKR PWHPGSSSFL ETQWNKFPRF HCFEDTSLFP VFTKGHVFTD  1320
GRDETTNGLM WLRGGPGDQG VNSLNFQGAG LFPWMQQRLD PTMLGNDQNQ QYQAMSAAAG  1380
LQNLGSGDLL RQQMMNFQQP FYLQQSGNSN PPLQLQKQQV IQQSVSPNIL QPQAQVLTEN  1440
LSQQLLLKPP INREDQAQQQ QHTYQDSLLI QTEQLHQRQH SNLPSPSYSK PDFFDSSMKL  1500
SAASVSPGQN MLGSLCPEGS GNLLNLSRSA QSMLTEQQLQ QQSWALECTP LQVIPFGNSV  1560
SHVQYSGKDA TMVSPHCNSD SQNSTLFGVN IDSSGLLLPT TVPRYITSSA DTDSSTMPLV  1620
ESGFQDSLYG CMQDSSELLQ SPGQLDPQNQ TRTFVKVYKS GSVGRSLDIS RFNSYHELRE  1680
ELAQMFAIEG KLEDPLRSGW QLVFVDREND VLLLGDDPWE SFVNNVWYIK ILSPEDIQKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.2	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW04426