PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04347

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 412aa MW: 45056.8 Da PI: 4.9123

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04347	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.5e-07	5	44	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ ++++++ +C+++ +lC +C + H+ H++ OIW04347 5 CDFCGDQRAVVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 *****************************65677777765 PP
2	zf-B_box	23.5	1.2e-07	46	89	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 +C+++++++++ C++ + lC++C +H g H++++ OIW04347 46 LVCERCNSEPASVQCTEESISLCQNCDWLGH-GtasssstHKRQT 89 68*****************************.5588888898776 PP
3	CCT	61	4e-21	355	398	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RY+eK+k RkFeK +rY+sRKa+A+ R+RvKGrFvk+ OIW04347 355 RSNAVMRYREKKKARKFEKSVRYASRKARADIRKRVKGRFVKAG 398 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MGYLCDFCGD QRAVVYCRSD AACLCLSCDR NVHSANALSR RHSRTLVCER CNSEPASVQC 60 TEESISLCQN CDWLGHGTAS SSSTHKRQTI NCYTGCPSSA ELSSIWSFFS DIPSMGEKCE 120 QELGLMSINE NRNNSTWVPL ESQNVSGSPQ VTDLPSKDRS SVGASSMPES SSKPRLPDQQ 180 PESADECIPK LNWSGKKSPG IFEDDDLYND FNMDEVDLEL ENYEELFGMT LSHSEDLFEN 240 GGIDSLFGTK EVAASAGNSN CQGAVAAEGS SIGLVNAVQP ACSNAASADS MLSSKTEPFL 300 RITGRQSQSN ISFSGISKDS STGDYQECGA SSTLPIGEPP WYSPCPESSL QYASRSNAVM 360 RYREKKKARK FEKSVRYASR KARADIRKRV KGRFVKAGDV YDYDPLSQTR SY

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MGYLCDFCGD QRAVVYCRSD AACLCLSCDR NVHSANALSR RHSRTLVCER CNSEPASVQC  60
TEESISLCQN CDWLGHGTAS SSSTHKRQTI NCYTGCPSSA ELSSIWSFFS DIPSMGEKCE  120
QELGLMSINE NRNNSTWVPL ESQNVSGSPQ VTDLPSKDRS SVGASSMPES SSKPRLPDQQ  180
PESADECIPK LNWSGKKSPG IFEDDDLYND FNMDEVDLEL ENYEELFGMT LSHSEDLFEN  240
GGIDSLFGTK EVAASAGNSN CQGAVAAEGS SIGLVNAVQP ACSNAASADS MLSSKTEPFL  300
RITGRQSQSN ISFSGISKDS STGDYQECGA SSTLPIGEPP WYSPCPESSL QYASRSNAVM  360
RYREKKKARK FEKSVRYASR KARADIRKRV KGRFVKAGDV YDYDPLSQTR SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-147	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW04347