PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04312

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 225aa MW: 25869.7 Da PI: 9.3898

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04312	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.5	7.5e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtf+kRr gi+KKA+ELSvLCda+va+++fs tgk+yey+s OIW04312 9 KKIDNVTARQVTFCKRRRGIFKKAQELSVLCDAKVALLVFSATGKFYEYAS 59 68***********************************************86 PP
2	K-box	48.4	3.9e-17	84	169	13	98
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ ++ ++ L+k++ + +++R+++Ged e L+l + q++e++Le++lk++ K++l+ ++i lqkk ++l++e k+L++k+ OIW04312 84 EMQLEDNTYNELRKKVAEKTQQLRRMKGEDFEGLNLDDVQHMEERLEEGLKRVIMAKEKLIADEIVALQKKGNKLEDERKQLKQKM 169 566678999*****999999************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MARQKRRIKK IDNVTARQVT FCKRRRGIFK KAQELSVLCD AKVALLVFSA TGKFYEYASS 60 SMKDILTRYN QHFHDINQRQ GPLEMQLEDN TYNELRKKVA EKTQQLRRMK GEDFEGLNLD 120 DVQHMEERLE EGLKRVIMAK EKLIADEIVA LQKKGNKLED ERKQLKQKMI MISKGKTPSM 180 VDSNIAIQET FSSDSMNNVC SCNSGPSIED DSSDTSLKLG LPFPD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	5	26	KRRIKKIDNVTARQVTFCKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24540.1	1e-72	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW04312