PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW04088

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 299aa MW: 34469.9 Da PI: 6.4063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW04088	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.1	1.8e-07	28	72	4	46
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT eE +++ a++ + ++ +W ++a++++ g+t +++ ++ OIW04088 28 WTREENKQFESAIAIYDKDtpdRWLKVAAMIP-GKTVFDVIKQYRE 72 ******************************.**999999875 PP
2	Myb_DNA-binding	43.4	7.6e-14	127	171	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r + ++t+ q+ s+ qky OIW04088 127 PWTEEEHRRFLMGLMKYGKGDWRNISRNFVVTKTPTQVASHAQKY 171 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MELETLYPPC FMSSSNLFVQ ESNNNIEWTR EENKQFESAI AIYDKDTPDR WLKVAAMIPG 60 KTVFDVIKQY RELEEDVTEI EAGRVPIPGY IASSFTFELV SNQNYDGCRK RAATVRGSDQ 120 ERKKGVPWTE EEHRRFLMGL MKYGKGDWRN ISRNFVVTKT PTQVASHAQK YYIRQKDSGV 180 KDKRRPSIHD ITTINLAETV TSDKNNPLLF NESPMHEPQQ KLGTSMSKVQ LDWINHYNDG 240 SLMVFNSNCD DLLKVQGQDL NDCAYHEAYA KLQIPSFRMA SRDFNKEAVF SIHALSCEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	2e-91	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW04088